rs117768176 chr7:33109572 T>C
- Sequence
ccacccgatccccgcctccccgcg[T/C]cgggccccaagtcaggggctccgg
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | -0.15 | 2.26 | -0.49 | Weak Concordant |
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Motif analysis
