rs11778951 chr8:119633395 A>G

Sequence
ttctccttggttcttagcccaggt[A/G]tttcctgaaagtgagagcaaaacc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) ARP-1(Plasma cell myeloma)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.41 1.96 1.002.2·10-3 1.28 n/a No Hit
IKZF2_HUMAN -2.06 2.44 1.007.1·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP total cholesterol triglycerides waist hip ratio
GTEx eQTL Artery_Tibial Breast_Mammary_Tissue Colon_Sigmoid Esophagus_Muscularis Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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