rs11804709 chr1:227311892 T>C

Sequence
ccaagtctgtatcttgcccatacc[T/C]tacactctttcccttcactaggtt
ASB in cell types
HEK293 (embryonic kidney)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney) 0.35 0.91 1.003.1·10-3 3.58
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  diastolic blood pressure (dbp),  ldl cholesterol change with statins,  systolic blood pressure (sbp)
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Minor_Salivary_Gland,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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