rs11807599 chr1:19505445 C>T
- Sequence
gtcatctggggtaaatatggaatg[C/T]aaaatctgttcttgtaataatcat
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ZN600_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.74 | 2.25 | 2.00 | n/a | No Hit | |||
| ZN600_HUMAN | n/a | 3.18 | 2.00 | n/a | n/a |
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