rs11866208 chr16:57300609 A>G

Sequence
aagcctcttcacaagttctgcaat[A/G]tgcgcatgcgtagtgggcagcgaa
ASB in cell types
K562 (myelogenous leukemia) HepG2 (hepatoblastoma) THP-1 (acute monocytic leukemia) erythroid cells
ASB for transcription factors
RAD21_HUMAN MNT_HUMAN NFAC2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.08 0.68 1.2·10-30.80 1.43 n/a n/a
MNT_HUMAN -0.34 1.11 1.000.03 2.00 n/a n/a
NFAC2_HUMAN 0.79 2.06 0.360.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Nerve_Tibial Spleen

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