rs11921429 chr3:19889203 G>A

Sequence
taaagacagaagtacctacactga[G/A]tatgaacagagggaaatgtataag
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -1.27 1.82 1.002.4·10-3 1.00 n/a n/a
SMCA4_HUMAN -0.25 2.30 1.005.1·10-3 1.00 n/a n/a
TCF21_HUMAN 1.47 n/a 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose serum creatinine
GTEx eQTL Esophagus_Mucosa Skin_Sun_Exposed_Lower_leg Testis

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