rs11925477 chr3:19889251 T>G
- Sequence
gggctctcagcagaaactggctga[T/G]tcacttgggagatgaaggggcaga
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) HCASMC (Human coronary artery smooth muscle cells) 22RV1 (prostate carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- SMRC1_HUMAN TCF21_HUMAN SMCA4_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | 0.57 | 2.07 | 1.00 | n/a | n/a | |||
| TCF21_HUMAN | 1.50 | n/a | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | 0.26 | 1.92 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 3.23 | 0.64 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | -0.72 | 1.79 | 1.33 | n/a | n/a |
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