rs11928114 chr3:4351102 T>C
- Sequence
aagagattgttcaaaggtaaaagc[T/C]cacaggcaatcatcaatgtgattc
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.60 | 0.35 | 1.49 | n/a | No Hit | |||
| ANDR_HUMAN | 2.27 | -0.76 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP microalbuminuria, sporadic creutzfeldt-jakob disease, tardive dyskinesia, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach