rs11959427 chr5:148826465 C>T
- Sequence
agttgggccccgcccgggccagcc[C/T]caggagaaggagggcgaggggagg
- ASB in cell types
- CD14+ monocytes foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) ESO-26 (Gastroesophageal junction adenocarcinoma)
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN RBM25_HUMAN KLF5_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -4.33 | 2.91 | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.46 | -2.18 | 1.00 | n/a | n/a | |||
| RBM25_HUMAN | 1.27 | -0.15 | 2.00 | n/a | n/a | |||
| KLF5_HUMAN | 1.70 | -2.97 | 1.50 | n/a | No Hit |
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