rs12034564 chr1:204508397 T>A
- Sequence
tgtaatcccatctactcaggaggc[T/A]gagtcaggagaatcgcttgaagct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ZN217_HUMAN GCR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN217_HUMAN | 2.82 | -2.71 | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 0.09 | 1.99 | 1.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Whole_Blood