rs12036829 chr1:44819992 G>A
- Sequence
tttatgcgctttgaagagaaaccc[G/A]agtatattcgtgacttccgcttcg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) monocytes from periferal blood
- ASB for transcription factors
- FOXK2_HUMAN SRBP2_HUMAN SKI_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.29 | -0.49 | 1.17 | n/a | n/a | |||
| SRBP2_HUMAN | 2.61 | n/a | 3.00 | n/a | No Hit | |||
| SKI_HUMAN | 2.42 | -2.26 | 1.00 | n/a | n/a |
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