rs12046720 chr1:101379147 G>C
- Sequence
tcccctacgggttgggggtaggga[G/C]tgaggctgtcagttacatgaagac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN IKZF1_HUMAN SMCA5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.05 | -1.75 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.14 | -0.16 | 2.00 | n/a | No Hit | |||
| SMCA5_HUMAN | 2.46 | -2.49 | 1.00 | n/a | No Hit |
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