rs12047986 chr1:155071336 A>G
- Sequence
gattcagtcccggggcgcgtcccc[A/G]tggaaagccagggctgagtccact
- ASB in cell types
- adult erythroblasts PANC1 (pancreatic ductal adenocarcinoma) uterus
- ASB for transcription factors
- CTCF_HUMAN RBBP5_HUMAN EZH2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.09 | 0.71 | 1.30 | 2.71 | Discordant | |||
| RBBP5_HUMAN | -1.51 | 2.55 | 2.00 | n/a | n/a | |||
| EZH2_HUMAN | -1.78 | 2.24 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg