rs12056979 chr9:69164030 A>G
- Sequence
caagtgcctctggtgattcctatc[A/G]tcagagaaatttaggacactgtct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LN95(Prostate adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MCF7 (Invasive ductal breast carcinoma) | 2.54 | -2.58 | 1.00 | |||
| LN95(Prostate adenocarcinoma) | -0.77 | 1.95 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP college completion, microalbuminuria, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Spleen, Testis, Vagina, Whole_Blood