rs12065911 chr1:11908323 C>T
- Sequence
gattccgttaaatcgcgtgtggag[C/T]tatgtaaagtgtattatagaacaa
- ASB in cell types
- K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) SUM159PT (Triple negative breast cancer) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- CDK8_HUMAN SMAD3_HUMAN SPT5H_HUMAN ARID2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | 2.87 | n/a | 1.50 | n/a | n/a | |||
| SMAD3_HUMAN | 2.38 | n/a | 2.00 | n/a | No Hit | |||
| SPT5H_HUMAN | 0.65 | -0.59 | 2.00 | n/a | n/a | |||
| ARID2_HUMAN | 1.90 | -0.95 | 1.50 | n/a | n/a | |||
| ETS1_HUMAN | 2.41 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood