rs12083727 chr1:20362015 G>T
- Sequence
ctgtgggcgtgcactgccttccag[G/T]cccggaccagctcctgccaaaggc
- ASB in cell types
- neural cell HMEC (human mammary epithelial cells) primary foreskin fibroblasts erythroid progenitors
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.76 | 0.26 | 1.43 | n/a | No Hit | |||
| RAD21_HUMAN | 1.02 | -0.04 | 1.53 | n/a | n/a | |||
| SMC1A_HUMAN | 2.07 | -0.29 | 1.50 | n/a | n/a |
Items per page:
1 – 3 of 3