rs12087955 - ADASTRA v5.1.3

Sequence: ttcctctttaagtctttttttata[A/C]aacatgatctgcctccccagggca
ASB in cell types: MDA-MB-231 (breast adenocarcinoma) SET2 (Adult acute megakaryoblastic leukemia, Homo Sapiens) breast tumor HDF(human dermal fibroblasts)
ASB for transcription factors: BRD4_HUMAN STAT1_HUMAN ESR1_HUMAN CTBP1_HUMAN
: Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold

Transcription factors

Cell types

Uniprot ID	Effect size Ref	Effect size Alt	FDR Ref	FDR Alt	Mean BAD	Motif fold change	Motif concordance
BRD4_HUMAN	1.29	0.03	1.7·10^-5	1.00	1.71	n/a	n/a
STAT1_HUMAN	2.54	-2.58	1.7·10^-3	1.00	1.00	n/a	No Hit
ESR1_HUMAN	2.69	-5.32	5.6·10^-3	1.00	2.00	n/a	No Hit
CTBP1_HUMAN	-2.35	2.66	1.00	0.01	1.00	n/a	n/a
E2F1_HUMAN	1.85	n/a	0.02	1.00	2.00	n/a	No Hit

Items per page:

1 – 5 of 7

GRASP diabetic retinopathy in type 2 diabetes mellitus, height, suicide attempts in bipolar disorder (males)

GTEx eQTL Brain_Spinal_cord_cervical_c-1, Colon_Sigmoid, Colon_Transverse, Lung, Nerve_Tibial, Pituitary, Testis, Whole_Blood