rs12092731 chr1:11908338 T>C
- Sequence
cgtgtggagctatgtaaagtgtat[T/C]atagaacaaatgcgagttacggtt
- ASB in cell types
- K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) HeLa-LTR-Luciferase cells G401 (rhabdoid tumor of the kidney)
- ASB for transcription factors
- SPT5H_HUMAN TYY1_HUMAN CDK8_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 1.61 | -0.99 | 1.62 | n/a | n/a | |||
| TYY1_HUMAN | n/a | 4.31 | 2.00 | n/a | No Hit | |||
| CDK8_HUMAN | 1.84 | -0.60 | 1.50 | n/a | n/a | |||
| RFOX2_HUMAN | 3.37 | -3.11 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 3.05 | -0.15 | 1.42 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood