rs12094257 chr1:24187118 C>T
- Sequence
accccgtgcctgtcccaggagctc[C/T]gggtccgagggtaggcgcggcccg
- ASB in cell types
- HEK293 (embryonic kidney) SMMC-7721 (hepatocellular carcinoma) primary B-CLL cells HEK293T (embryonic kidney)
- ASB for transcription factors
- CATA_HUMAN BRD4_HUMAN ZFX_HUMAN PTEN_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CATA_HUMAN | n/a | 2.03 | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.10 | 0.37 | 2.00 | n/a | n/a | |||
| ZFX_HUMAN | -0.75 | 2.02 | 2.00 | n/a | No Hit | |||
| PTEN_HUMAN | -4.75 | 2.34 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Ovary, Testis, Thyroid, Whole_Blood