rs12106014 chr20:10035113 T>C
- Sequence
ggggacccggggcccatggacaca[T/C]acacccagccctgctgtcccgcgc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZN444_HUMAN TYY1_HUMAN IKZF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN444_HUMAN | -2.14 | 2.44 | 1.00 | n/a | n/a | |||
| TYY1_HUMAN | n/a | 2.30 | 1.50 | n/a | No Hit | |||
| IKZF5_HUMAN | -2.60 | 2.70 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood