rs12135008 chr1:154411817 G>A

Sequence
aggagttcgaggctgcagtgaacc[G/A]tgacagcaacactgcactccaacc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.38 2.55 1.007.2·10-4 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex

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