rs12145184 chr1:179230056 A>C

Sequence
tgagtgagtcgagggctcagtgcc[A/C]ccgcgtgcgcagctcaggtgcagg
ASB in cell types
WA01 (H1, human embryonic stem cells) MKL-1 (Merkel cell carcinoma)
ASB for transcription factors
MAX_HUMAN E2F6_HUMAN ZFX_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MAX_HUMAN 2.93 -0.47 3.5·10-81.00 1.00 n/a No Hit
E2F6_HUMAN 3.05 n/a 8.3·10-41.00 1.00 n/a No Hit
ZFX_HUMAN -1.79 1.99 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland Colon_Transverse Heart_Atrial_Appendage Lung Nerve_Tibial Thyroid

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