ADASTRA v5.1.3
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rs12145184
chr1:179230056
A
>
C
Sequence
tgagtgagtcgagggctcagtgcc[A/C]ccgcgtgcgcagctcaggtgcagg
ASB in cell types
WA01 (H1, human embryonic stem cells)
MKL-1 (Merkel cell carcinoma)
ASB for transcription factors
MAX_HUMAN
E2F6_HUMAN
ZFX_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MAX_HUMAN
2.93
-0.47
3.5·10
-8
1.00
1.00
n/a
No Hit
E2F6_HUMAN
3.05
n/a
8.3·10
-4
1.00
1.00
n/a
No Hit
ZFX_HUMAN
-1.79
1.99
1.00
0.04
1.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Colon_Transverse
,
Heart_Atrial_Appendage
,
Lung
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)