rs12163 chr18:5238500 C>T
- Sequence
cagtactggggcttcgtggacgcg[C/T]tgtagcgggtcttcgccgtcgtgg
- ASB in cell types
- K562 (myelogenous leukemia) CAR-T cells
- ASB for transcription factors
- EMSY_HUMAN ZN316_HUMAN IRF4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EMSY_HUMAN | 3.12 | -3.00 | 1.00 | n/a | n/a | |||
| ZN316_HUMAN | 2.62 | -1.04 | 1.00 | n/a | n/a | |||
| IRF4_HUMAN | -1.39 | 1.64 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Muscle_Skeletal, Nerve_Tibial