rs12187057 chr5:16547537 G>A

Sequence
gcaacaatgggaatttaatttatg[G/A]cccaaaaataaataacttatgttt
ASB in cell types
VCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma) 0.03 1.11 1.007.1·10-6 2.04
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  hdl cholesterol,  total cholesterol change with statins
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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