rs12189316 chr5:16733838 G>T
- Sequence
ctctccaggctggactctgggcag[G/T]gggcgccacgagttgacggctcgg
- ASB in cell types
- iPS-derived chondrocytes
- ASB for transcription factors
- RARA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.01 | -0.66 | 1.00 | -2.50 | Concordant |
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Motif analysis
