rs12196893 chr6:149129911 A>G
- Sequence
tcgaactactcatcattgagcaac[A/G]ggaattttcagagcggtggccgta
- ASB in cell types
- K562 (myelogenous leukemia) JB6 (Human anaplastic large cell lymphoma)
- ASB for transcription factors
- CEBPB_HUMAN SMCE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.60 | -0.44 | 2.08 | -0.82 | Weak Concordant | |||
| SMCE1_HUMAN | 2.51 | -2.35 | 1.00 | n/a | n/a |
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Motif analysis
