rs12216191 chr6:158263021 G>A

Sequence
caaggaagtaaaacagatgtgtct[G/A]tatctttgtgtccctgtgtctgtg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN 2.42 -2.23 0.021.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol height obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Esophagus_Mucosa Heart_Left_Ventricle Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic

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