rs12251374 chr10:38527290 A>G
- Sequence
aatagaatggattggactcgaatg[A/G]aatcgaatgggatgcagtcgaatg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) HeLa S3 (cervical adenocarcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- CENPA_HUMAN CTBP1_HUMAN ZN687_HUMAN SIX4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CENPA_HUMAN | n/a | 2.52 | 3.00 | n/a | n/a | |||
| CTBP1_HUMAN | -5.09 | 2.83 | 2.50 | n/a | n/a | |||
| ZN687_HUMAN | n/a | 3.52 | 2.00 | n/a | n/a | |||
| SIX4_HUMAN | n/a | 3.05 | 3.00 | n/a | n/a | |||
| ERR1_HUMAN | n/a | 2.96 | 2.00 | n/a | No Hit |
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