rs12255421 chr10:38529111 A>T
- Sequence
ggaagggcatgtaatgtaatagaa[A/T]ggaccctaatggaatggaatctaa
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) A549 (lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN MCM3_HUMAN FOXK2_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.22 | 1.58 | 2.54 | n/a | No Hit | |||
| MCM3_HUMAN | n/a | 3.67 | 3.00 | n/a | n/a | |||
| FOXK2_HUMAN | -1.07 | 1.98 | 3.25 | n/a | n/a | |||
| ZFX_HUMAN | -0.29 | 1.81 | 2.80 | n/a | No Hit | |||
| ZN687_HUMAN | -1.35 | 2.27 | 2.00 | n/a | n/a |
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