ADASTRA v5.1.3
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rs12275123
chr11:361421
A
>
G
Sequence
cagggtcggtgggtttttctcccc[A/G]tgtgcagagacgagagagtgtaga
ASB in cell types
K562 (myelogenous leukemia)
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
MITF_HUMAN
ATF3_HUMAN
ARI1B_HUMAN
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MITF_HUMAN
n/a
3.63
1.00
1.0·10
-4
2.00
n/a
No Hit
ATF3_HUMAN
n/a
3.44
1.00
3.9·10
-4
2.00
n/a
No Hit
ARI1B_HUMAN
-5.32
3.14
1.00
6.0·10
-3
2.00
n/a
n/a
BRD4_HUMAN
-0.26
2.24
1.00
0.05
1.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)