rs12322423 chr12:51391797 G>T

Sequence
gggcccgggaactcccggcggacc[G/T]gcagaggggcgccccggcttctct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HL-60 (acute myeloid leukemia)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.62 0.85 0.675.5·10-3 1.01
HL-60 (acute myeloid leukemia) -0.06 1.51 1.000.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum refractive error rheumatoid arthritis
GTEx eQTL Cells_Cultured_fibroblasts Whole_Blood

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