rs12357045 chr10:33509431 T>A
- Sequence
ttggtattatccttagacagacta[T/A]cctcatctatatctgcactctcat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- IKZF2_HUMAN REQU_HUMAN ANDR_HUMAN ATF2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -0.74 | 1.40 | 1.00 | n/a | n/a | |||
| REQU_HUMAN | -2.23 | 2.61 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 1.77 | 0.51 | 1.22 | n/a | No Hit | |||
| ATF2_HUMAN | -0.41 | 0.64 | 1.00 | 2.11 | Concordant |
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Motif analysis
