ADASTRA v5.1.3
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rs12370622
chr12:47206107
C
>
T
Sequence
acaagatcagatgaaccagtttac[C/T]gatctggatggtgtcagctgatcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MITF_HUMAN
EMSY_HUMAN
SOX6_HUMAN
SMCE1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MITF_HUMAN
n/a
2.48
1.00
7.5·10
-4
2.00
n/a
No Hit
EMSY_HUMAN
n/a
2.09
1.00
0.01
2.00
n/a
n/a
SOX6_HUMAN
n/a
2.88
1.00
0.03
2.00
n/a
n/a
SMCE1_HUMAN
-1.72
2.77
1.00
0.04
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)