rs12370622 chr12:47206107 C>T

Sequence
acaagatcagatgaaccagtttac[C/T]gatctggatggtgtcagctgatcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MITF_HUMAN EMSY_HUMAN SOX6_HUMAN SMCE1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MITF_HUMAN n/a 2.48 1.007.5·10-4 2.00 n/a No Hit
EMSY_HUMAN n/a 2.09 1.000.01 2.00 n/a n/a
SOX6_HUMAN n/a 2.88 1.000.03 2.00 n/a n/a
SMCE1_HUMAN -1.72 2.77 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Spleen Testis Thyroid Whole_Blood

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