rs12374141 chr3:16665629 A>G

Sequence
gagctgtagctttatgaccataat[A/G]tgtgacctatgtgctggcatgatg
ASB in cell types
HEK293 (embryonic kidney) PC3(bone mets prostate adenocarcinoma)
ASB for transcription factors
PRD10_HUMAN ZN843_HUMAN DAXX_HUMAN ZN629_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRD10_HUMAN n/a 2.67 1.007.8·10-5 2.00 n/a n/a
ZN843_HUMAN -2.32 3.11 1.009.6·10-3 2.00 n/a n/a
DAXX_HUMAN n/a 2.30 1.000.01 1.00 n/a n/a
ZN629_HUMAN n/a 2.13 1.000.04 2.00 n/a n/a
SP7_HUMAN n/a 1.67 1.000.04 2.00 n/a n/a
Items per page:
1 – 5 of 6

Motif analysis

No data available

Genetic associations

GRASP homa-b

Download