ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs12379
chr12:51049161
G
>
A
Sequence
ggtcgtcatttcccccgcttctat[G/A]tcctgtacacaatcttcatgaaag
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.22
0.82
1.00
2.1·10
-3
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
celiac disease
,
hypertension (early onset hypertension)
,
resistance to kuru in aged women despite likely exposure
,
sporadic creutzfeldt-jakob disease
,
triglycerides
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Testis
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale