rs12402050 chr1:147851425 T>C
- Sequence
tgagtcattttaatcagtccactt[T/C]ctgccagtagctcagagtcctctt
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium) A-673 clone Asp114 (Ewing sarcoma) CAR-T cells
- ASB for transcription factors
- ATF3_HUMAN ARI1B_HUMAN COT1_HUMAN TIF1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 2.28 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 3.20 | 2.00 | n/a | n/a | |||
| COT1_HUMAN | n/a | 3.62 | 2.00 | n/a | No Hit | |||
| TIF1A_HUMAN | -4.76 | 2.67 | 2.00 | n/a | n/a | |||
| EMSY_HUMAN | n/a | 3.00 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 11
Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, body mass index (bmi), cystatin c in serum