rs12402498 chr1:6613720 C>G
- Sequence
agactacatttcccgacaggcctc[C/G]cggctctcccgccctccctcccga
- ASB in cell types
- adult erythroblasts breast tumor
- ASB for transcription factors
- HCFC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | 0.47 | n/a | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Testis, Thyroid, Whole_Blood