rs12408923 chr1:186212633 T>A

Sequence
cctatagataaaggcatgctttgc[T/A]aagttttctgcaagtgctctttct
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) 22RV1 (prostate carcinoma) HEK293 (embryonic kidney)
ASB for transcription factors
TCF21_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.99 n/a 2.4·10-41.00 2.50 n/a n/a
ANDR_HUMAN 2.34 n/a 6.8·10-31.00 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum ldl cholesterol total cholesterol
GTEx eQTL Artery_Aorta Brain_Cerebellar_Hemisphere Thyroid

Download