rs12419034 chr11:111237186 C>A

Sequence
caaggactatgtagggtaatttgg[C/A]aatatctatcaagatttaaaatcc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.26 0.37 7.9·10-31.00 1.43 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  hdl cholesterol,  serum creatinine,  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Small_Intestine_Terminal_Ileum,  Spleen,  Stomach,  Thyroid,  Uterus

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