rs12421300 chr11:35919583 T>C
- Sequence
accctcagtcatcctttgtattac[T/C]tattgtttgcaggcagctgcaggg
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) TCam-2 (Testicular seminoma)
- ASB for transcription factors
- SOX17_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX17_HUMAN | -0.23 | 1.72 | 1.50 | 3.39 | Concordant | |||
| TF65_HUMAN | 1.67 | -4.66 | 2.50 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
