rs12451871 chr17:27197707 A>G
- Sequence
cgagccttctgttatgcccggaca[A/G]ggccaccagagggctccttggtct
- ASB in cell types
- GM18951 (B-cells Lymphoblastoid Cell Lines) VCaP (prostate carcinoma) LNCaP (prostate carcinoma) Peyer's patch
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.19 | -1.60 | 1.75 | 0.37 | Weak Discordant |
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Motif analysis
