rs12475818 chr2:75147139 T>G
- Sequence
tggcagaatattttcctgtttgtc[T/G]aagcagatgccagcacttaaataa
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN FOXA1_HUMAN JUN_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.26 | -0.12 | 1.60 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.58 | -0.69 | 1.62 | -1.48 | Weak Concordant | |||
| JUN_HUMAN | 1.14 | -0.20 | 1.00 | n/a | No Hit |
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Motif analysis
