rs12475819 chr2:100770387 A>G

Sequence
aagattcaaatcatccagatctga[A/G]taatggaaaatttttaggttccta
ASB in cell types
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN n/a 3.04 1.005.7·10-4 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol
GTEx eQTL Esophagus_Mucosa Pancreas Skin_Not_Sun_Exposed_Suprapubic

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