rs12484057 chr22:44532853 G>A
- Sequence
tgcacctgcggtgagcagctgtgt[G/A]catttccgccctctgcaaacatcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MDA-MB-134 (invasive lobular breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.23 | 1.58 | 1.52 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.52 | 2.10 | 1.54 | 1.25 | Weak Concordant |
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Motif analysis
