rs12492478 chr3:33427924 A>G

Sequence
gaagacttcaggccaggagcagtg[A/G]ctcacacctataattccagcactt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN ZXDB_HUMAN KLF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 2.36 -3.99 9.8·10-41.00 1.50 n/a n/a
ZXDB_HUMAN 2.30 -1.98 0.021.00 1.00 n/a n/a
KLF1_HUMAN 2.06 -1.81 0.021.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP prop taste detection threshold
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Whole_Blood

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