ADASTRA v5.1.3
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rs12492478
chr3:33427924
A
>
G
Sequence
gaagacttcaggccaggagcagtg[A/G]ctcacacctataattccagcactt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
GLIS1_HUMAN
ZXDB_HUMAN
KLF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN
2.36
-3.99
9.8·10
-4
1.00
1.50
n/a
n/a
ZXDB_HUMAN
2.30
-1.98
0.02
1.00
1.00
n/a
n/a
KLF1_HUMAN
2.06
-1.81
0.02
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
prop taste detection threshold
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)