rs12492865 chr3:177561567 C>T
- Sequence
agaaagccccctgttgggctgttt[C/T]tctagcactcattggaggtatgta
- ASB in cell types
- MS-1 (Small cell lung carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MS-1 (Small cell lung carcinoma) | -1.02 | 1.70 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP major depressive disorder (broad definition), major depressive disorder (broad definition) (females), obesity with early age of onset (age >2)