rs12499402 chr4:36486800 A>G
- Sequence
ggtaagcaaacattcaacctggtc[A/G]ttcaacctgttctgtgagttcagt
- ASB in cell types
- VCaP (prostate carcinoma) bronchial epithelial cells
- ASB for transcription factors
- GRHL2_HUMAN BCOR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GRHL2_HUMAN | -1.80 | 2.51 | 1.83 | 2.70 | Concordant | |||
| BCOR_HUMAN | n/a | 2.79 | 3.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
