rs12528506 chr6:140898024 C>G
- Sequence
ccatgcgtcccagccccagcaggg[C/G]aaggaactgctgcttagcaatggg
- ASB in cell types
- THP-1 (acute monocytic leukemia) AML (monocytes and acute myeloid leukemia) EOL-1 (Acute myeloid leukemia) SKNO-1 (acute myeloid leukemia)
- ASB for transcription factors
- SPI1_HUMAN MTG8_HUMAN ERG_HUMAN MYB_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.52 | 1.88 | 1.85 | 1.56 | Weak Concordant | |||
| MTG8_HUMAN | -0.70 | 1.55 | 1.50 | n/a | n/a | |||
| ERG_HUMAN | n/a | 2.58 | 1.50 | n/a | No Hit | |||
| MYB_HUMAN | -0.26 | 2.10 | 1.00 | n/a | No Hit | |||
| SMRC1_HUMAN | -4.33 | 1.91 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Hippocampus, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle