ADASTRA v5.1.3
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rs12529
chr10:5094459
C
>
G
Sequence
gtgacagggaatggattccaaaca[C/G]cagtgtgtaaagctaaatgatggc
ASB in cell types
HepG2 (hepatoblastoma)
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma)
0.01
1.03
1.00
2.2·10
-11
1.15
K562 (myelogenous leukemia)
-0.19
1.03
1.00
3.7·10
-6
2.06
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
college completion
,
ldl cholesterol change with statins
,
simpson-angus scale
,
total cholesterol change with statins
,
triglycerides
,
years of education
GTEx eQTL
Esophagus_Mucosa
,
Heart_Left_Ventricle
,
Liver
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale