rs12545372 chr8:118810334 T>A

Sequence
cggggactttcagtgatgaggtca[T/A]tgactgctaaggttaatggcaaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.45 -2.05 3.0·10-41.00 1.00 n/a n/a
IKZF1_HUMAN 1.81 -1.76 4.5·10-31.00 1.25 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp) systolic blood pressure (sbp)
GTEx eQTL Artery_Tibial Esophagus_Mucosa Heart_Left_Ventricle

Download