ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs12545372
chr8:118810334
T
>
A
Sequence
cggggactttcagtgatgaggtca[T/A]tgactgctaaggttaatggcaaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN
IKZF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
2.45
-2.05
3.0·10
-4
1.00
1.00
n/a
n/a
IKZF1_HUMAN
1.81
-1.76
4.5·10
-3
1.00
1.25
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
systolic blood pressure (sbp)
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)